ay be different.
delta expression of a gene was generated using the following
. Suppose a vector of K (58 for the letrozole drug data) case
ns was expressed as below, where n was the nth gene in data,
ܠൌ൫ݔ,ଵ, ݔ,ଶ, ⋯, ݔ,൯
(6.38)
xpressions in this vector were sorted in an ascending order and
d as below,
ܠൌ൫ݔ,ଵ
ᇱ, ݔ,ଶ
ᇱ, ⋯, ݔ,
ᇱ
൯
(6.39)
ta expression vector was generated by calculating the difference
all consecutive pairs of sorted expressions,
ൌ൫ݔ,ଶ
ᇱ
െݔ,ଵ
ᇱ, ݔ,ଷ
ᇱ
െݔ,ଶ
ᇱ, ⋯, ݔ,
ᇱ
ᇱ
െݔ,ሺିଵሻ൯
(6.40)
e 6.32 has shown that the Gamma density modelling process
ery well for fitting the Gamma density to the delta expressions of
es selected from the letrozole drug data. Based on an estimated
density function, the significance of each delta expression can be
d.
e 6.33 shows the relationship between the Gamma p values and
expressions for three genes from the letrozole drug data shown
6.32. In these plots, it can be seen that some genes contained
ntly great delta expressions, such as the genes ZMIZ2 in Figure
nd ATP10B in Figure 6.33(b). However, some genes did not
a significantly great delta expression, such as the gene
P28 in Figure 6.33(c). A gene containing no such a significantly
ta expression implies that the expressions of such a gene very
m a unimodal distribution. Otherwise, the expressions of such a
y form a multi-modal distribution including a bimodal distribution
s a gene with outliers.